PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24765-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 273aa    MW: 29634.2 Da    PI: 5.0593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24765-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.28.1e-054489554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     + erE+  Rd +N+ f+eL e+l  +     + + Ka iL+ +++ +++L
  TRIUR3_24765-P1 44 KAEREKHKRDLLNDLFSELDEMLEAD----RQTNGKACILTDTTRILRDL 89
                     579********************997....57788888998888887776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.5E-1037109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.4393989IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-744108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MVAMLPAARG DAAPAASAGA ADKLVHGPVT DGKCKKKAPR MIHKAEREKH KRDLLNDLFS  60
ELDEMLEADR QTNGKACILT DTTRILRDLL SQLESLRKEN STLQNESHYV TMERNELQDE  120
NGVLRNEILE LQNELATLPA GNPGWGHATA GSPHPAGTVF PSQQPMQPTT IASAVFPLQQ  180
PLQQTTILEH PYAPPPPPRE LKLFPDAASD IEGLEPSEDQ EAANHIARPL ARYPTQSALW  240
PVSLGLPRME DEQCSSGTTG SSKEGSSSAS SRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ5342750.0KJ534275.1 Triticum aestivum isolate Ta_IRO3_2 putative transcription factor bHLH mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003557817.11e-128PREDICTED: transcription factor bHLH47
TrEMBLM7ZH760.0M7ZH76_TRIUA; Transcription factor bHLH47
STRINGMLOC_72614.11e-150(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24813884
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.33e-23bHLH family protein